PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_9969_iso_4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family ERF
Protein Properties Length: 238aa    MW: 25526.8 Da    PI: 5.3835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_9969_iso_4genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.41.7e-0856932655
                                  AP2 26 g........krkrfslgkfgtaeeAakaaiaarkkleg 55
                                         g        k+ r++lg++ t+e+Aa+a++ a+ +++g
  cra_locus_9969_iso_4_len_1103_ver_3 56 GypkfxeprKKSRIWLGTYSTPEMAARAHDVAAMSIKG 93
                                         244454553469*********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.26226101IPR001471AP2/ERF domain
SMARTSM003807.1E-1437107IPR001471AP2/ERF domain
CDDcd000185.11E-1762101No hitNo description
SuperFamilySSF541714.12E-1162102IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-1762102IPR001471AP2/ERF domain
PfamPF008472.1E-56493IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MAAESSSYTS SSSSSSSSSR SSSSSSTSSL KKKKQQRPKR QQIRDNNNHS GGVVNGYPKF  60
XEPRKKSRIW LGTYSTPEMA ARAHDVAAMS IKGKSAILNF PQLTESLPRP ASLSPRDVQA  120
AAAKAAAMEE LTITTSSFSP SPSTSSSSSS SMSESTRTET TASEELGQII ELPSLEGSCY  180
DSSESRTELA LFDSAEEGWV FPPWLTSDGD LYGFINIDQA AVGEFLIPSS FDTVKWVS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015060644.17e-53PREDICTED: dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD39e-45DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLK4C7S91e-52K4C7S9_SOLLC; Uncharacterized protein
STRINGSolyc06g066540.1.13e-52(Solanum lycopersicum)